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PPR Genes in Plants

View supplementary material for a genome-wide comparison of pentatricopeptide (PPR) repeat genes in rice, Arabidopsis and Physcomitrella patens.

(Nicholas O'Toole, Mitsuru Hattori, Charles Andres, Kei Iida, Claire Lurin, Christian Schmitz-Linneweber, Mamoru Sugita and Ian Small. Mol Biol Evol. 25, 1120-1128 (2008).)

ModuleFinder and CoReg:

alternative tools for linking gene expression modules with promoter sequences motifs to uncover gene regulation mechanisms in plants

Kathryn E Holt, A. Harvey Millar and James Whelan

Plant Methods (in press on-line)

Downloadable supplementary files:

Arabidopsis SubCellular Proteomic Database (SUBA)

The SubCellular Proteomic Database (SUBA) houses large scale proteomic and GFP localisation sets from cellular compartments of Arabidopsis. It also contains precompiled bioinformatic predictions for protein subcellular localisations.

SUBA Tutorial PDF